Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_103514 | Not Available | Positive | 2550387 - 2551358 | 33831.4 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05444680_103515 | Not Available | Positive | 2551366 - 2552451 | 38721.8 |
| hydroxyquinol 1,2-dioxygenase | SAMN05444680_103516 | Not Available | Positive | 2552435 - 2553301 | 31501.3 |
| demethylmenaquinone methyltransferase | SAMN05444680_103517 | Not Available | Positive | 2553329 - 2554105 | 28501.3 |
| curli biogenesis system outer membrane secretion channel csgg | SAMN05444680_103518 | Not Available | Negative | 2554152 - 2555057 | 30589.5 |
| uncharacterized protein, contains gyd domain | SAMN05444680_103519 | Not Available | Negative | 2555367 - 2555657 | 10331.6 |
| ribokinase | SAMN05444680_103520 | Not Available | Negative | 2555853 - 2556791 | 31679.3 |
| ribose 5-phosphate isomerase b | SAMN05444680_103521 | Not Available | Negative | 2556806 - 2557255 | 16060.2 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444680_103522 | Not Available | Negative | 2557287 - 2558078 | 28609.8 |
| amino acid abc transporter atp-binding protein, paat family | SAMN05444680_103523 | Not Available | Negative | 2558123 - 2558884 | 27408.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
