Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autotransporter secretion outer membrane protein tama | SAMN05444680_103494 | Not Available | Negative | 2530799 - 2532652 | 67681.3 |
| hypothetical protein | SAMN05444680_103495 | Not Available | Negative | 2532730 - 2533917 | 46150.9 |
| protein n-acetyltransferase, rimj/riml family | SAMN05444680_103496 | Not Available | Negative | 2533924 - 2534532 | 22674.1 |
| moxr-like atpase | SAMN05444680_103497 | Not Available | Negative | 2534542 - 2535384 | 32176.0 |
| cytochrome c553 | SAMN05444680_103498 | Not Available | Positive | 2535463 - 2536221 | 27081.5 |
| protein of unknown function | SAMN05444680_103499 | Not Available | Negative | 2536309 - 2536743 | 16503.5 |
| transcriptional regulator, lysr family | SAMN05444680_103500 | Not Available | Positive | 2536806 - 2537753 | 34990.3 |
| hypothetical protein | SAMN05444680_103501 | Not Available | Positive | 2537763 - 2538131 | 13105.0 |
| hypothetical protein | SAMN05444680_103502 | Not Available | Positive | 2538307 - 2538816 | 18797.3 |
| hypothetical protein | SAMN05444680_103503 | Not Available | Positive | 2538841 - 2539848 | 37840.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
