Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted metalloprotease, contains c-terminal pdz domain | SAMN05444680_103434 | Not Available | Negative | 2461839 - 2463632 | 66452.0 |
| thiol:disulfide interchange protein dsbc | SAMN05444680_103435 | Not Available | Negative | 2463632 - 2464375 | 27261.8 |
| ubiquinone biosynthesis hydroxylase, ubih/ubif/visc/coq6 family | SAMN05444680_103436 | Not Available | Negative | 2464372 - 2465514 | 41611.8 |
| hypothetical protein | SAMN05444680_103437 | Not Available | Positive | 2465594 - 2466475 | 32249.6 |
| hypothetical protein | SAMN05444680_103438 | Not Available | Positive | 2466544 - 2467635 | 39487.3 |
| glutathione s-transferase | SAMN05444680_103439 | Not Available | Positive | 2467666 - 2468340 | 24959.3 |
| membrane protein yqaa, snare-associated domain | SAMN05444680_103440 | Not Available | Negative | 2468353 - 2468823 | 17162.3 |
| pp_02376 | SAMN05444680_103441 | Not Available | Positive | 2469006 - 2470064 | Not Available |
| dna-binding protein fis | SAMN05444680_103442 | Not Available | Positive | 2470097 - 2470333 | 9060.1 |
| imp cyclohydrolase /phosphoribosylaminoimidazolecarboxamide formyltransferase | SAMN05444680_103443 | Not Available | Positive | 2470340 - 2471911 | 55968.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
