Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_103424 | Not Available | Negative | 2452417 - 2452851 | 15217.7 |
| holliday junction dna helicase subunit ruvb | SAMN05444680_103425 | Not Available | Positive | 2452955 - 2454010 | 38420.4 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN05444680_103426 | Not Available | Negative | 2453980 - 2455746 | 64608.2 |
| udp-2,3-diacylglucosamine pyrophosphatase lpxh | SAMN05444680_103427 | Not Available | Positive | 2455891 - 2456760 | 33347.8 |
| udp-n-acetylglucosamine:lps n-acetylglucosamine transferase | SAMN05444680_103428 | Not Available | Positive | 2456757 - 2457926 | 42810.1 |
| protocatechuate 3,4-dioxygenase beta subunit | SAMN05444680_103429 | Not Available | Positive | 2458316 - 2458963 | 23593.9 |
| Trna-met | Not Available | Not Available | Positive | 2459032 - 2459108 | Not Available |
| rna polymerase, sigma subunit, ecf family | SAMN05444680_103431 | Not Available | Positive | 2459275 - 2459889 | 23027.2 |
| hypothetical protein | SAMN05444680_103432 | Not Available | Positive | 2459886 - 2461001 | 39188.2 |
| enoyl-coa hydratase | SAMN05444680_103433 | Not Available | Negative | 2461008 - 2461787 | 27702.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
