Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anhydro-n-acetylmuramic acid kinase | SAMN05444680_103414 | Not Available | Negative | 2443722 - 2444831 | 37872.3 |
| murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domain | SAMN05444680_103415 | Not Available | Negative | 2444869 - 2446218 | 48027.2 |
| tyrosyl-trna synthetase | SAMN05444680_103416 | Not Available | Positive | 2446387 - 2447619 | 45113.2 |
| outer membrane protein ompa | SAMN05444680_103417 | Not Available | Negative | 2447629 - 2448240 | 21750.7 |
| fecr family protein | SAMN05444680_103418 | Not Available | Negative | 2448237 - 2448725 | 16794.3 |
| cation diffusion facilitator family transporter | SAMN05444680_103419 | Not Available | Positive | 2448763 - 2449797 | 36990.2 |
| d-tyrosyl-trna(tyr) deacylase | SAMN05444680_103420 | Not Available | Positive | 2449794 - 2450237 | 15453.7 |
| probable rrna maturation factor | SAMN05444680_103421 | Not Available | Negative | 2450247 - 2450699 | 16839.1 |
| phosphate starvation-inducible protein phoh | SAMN05444680_103422 | Not Available | Negative | 2450701 - 2451663 | 35009.1 |
| holliday junction dna helicase subunit ruva | SAMN05444680_103423 | Not Available | Positive | 2451824 - 2452396 | 19926.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
