Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_103403 | Not Available | Negative | 2435205 - 2435843 | 22141.9 |
| adenosylhomocysteinase | SAMN05444680_103405 | Not Available | Positive | 2436074 - 2437501 | 51645.9 |
| 23s rrna (cytidine1920-2'-o)/16s rrna (cytidine1409-2'-o)-methyltransferase | SAMN05444680_103406 | Not Available | Positive | 2437537 - 2438319 | 27556.0 |
| 5,10-methylenetetrahydrofolate reductase (nad(p)) | SAMN05444680_103407 | Not Available | Positive | 2438261 - 2439130 | 31430.7 |
| rare lipoprotein a | SAMN05444680_103408 | Not Available | Positive | 2439127 - 2439780 | 22867.4 |
| 23s rrna (adenine2030-n6)-methyltransferase | SAMN05444680_103409 | Not Available | Negative | 2439794 - 2440687 | 32344.7 |
| lsu ribosomal protein l13p | SAMN05444680_103410 | Not Available | Positive | 2440840 - 2441313 | 17253.2 |
| ssu ribosomal protein s9p | SAMN05444680_103411 | Not Available | Positive | 2441326 - 2441718 | 14351.3 |
| iron-sulfur cluster insertion protein | SAMN05444680_103412 | Not Available | Positive | 2441840 - 2442205 | 12895.0 |
| drug resistance transporter, emrb/qaca subfamily | SAMN05444680_103413 | Not Available | Positive | 2442285 - 2443703 | 49953.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
