Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidase | SAMN05444680_103393 | Not Available | Negative | 2424728 - 2426098 | 48954.6 |
| transcriptional regulator, lysr family | SAMN05444680_103394 | Not Available | Positive | 2426221 - 2427195 | 35732.8 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444680_103395 | Not Available | Positive | 2427540 - 2428442 | 32298.8 |
| amino acid abc transporter membrane protein 1, paat family | SAMN05444680_103396 | Not Available | Positive | 2428533 - 2429258 | 26834.2 |
| amino acid abc transporter membrane protein 2, paat family | SAMN05444680_103397 | Not Available | Positive | 2429260 - 2429925 | 24701.4 |
| glutamate/aspartate transport system atp-binding protein | SAMN05444680_103398 | Not Available | Positive | 2429944 - 2430693 | 27419.7 |
| predicted n-acetyltransferase yhbs | SAMN05444680_103399 | Not Available | Negative | 2430836 - 2431678 | 30403.3 |
| protein of unknown function | SAMN05444680_103400 | Not Available | Positive | 2431797 - 2432627 | 29673.8 |
| hypothetical protein | SAMN05444680_103401 | Not Available | Negative | 2432614 - 2433456 | 30645.3 |
| bacterial peptide chain release factor 3 (brf-3) | SAMN05444680_103402 | Not Available | Negative | 2433453 - 2435084 | 60513.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
