Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_103383 | Not Available | Positive | 2414326 - 2414760 | 15699.9 |
| 3-hydroxyacyl-coa dehydrogenase | SAMN05444680_103384 | Not Available | Positive | 2414792 - 2417191 | 86106.1 |
| acetyl-coa acyltransferase | SAMN05444680_103385 | Not Available | Positive | 2417203 - 2418402 | 41862.7 |
| thioesterase-like superfamily protein | SAMN05444680_103386 | Not Available | Positive | 2418481 - 2419314 | 30285.0 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05444680_103387 | Not Available | Positive | 2419319 - 2420065 | 26942.2 |
| 2-hydroxychromene-2-carboxylate isomerase | SAMN05444680_103388 | Not Available | Positive | 2420078 - 2420671 | 21734.3 |
| enoyl-coa hydratase/carnithine racemase | SAMN05444680_103389 | Not Available | Positive | 2420698 - 2421462 | 27200.0 |
| acyl-coa thioesterase ycia | SAMN05444680_103390 | Not Available | Negative | 2421476 - 2421898 | 15160.4 |
| atp-binding cassette, subfamily b | SAMN05444680_103391 | Not Available | Positive | 2421939 - 2423771 | 67754.4 |
| lactate dehydrogenase | SAMN05444680_103392 | Not Available | Positive | 2423793 - 2424731 | 33045.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
