Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-3-deoxy-l-fuconate dehydrogenase | SAMN05444680_103373 | Not Available | Positive | 2404260 - 2404994 | 25562.9 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05444680_103374 | Not Available | Positive | 2404991 - 2405737 | 25937.0 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05444680_103375 | Not Available | Positive | 2405771 - 2406619 | 30638.4 |
| calcineurin-like phosphoesterase | SAMN05444680_103376 | Not Available | Negative | 2407301 - 2408131 | 31481.3 |
| hypothetical protein | SAMN05444680_103377 | Not Available | Negative | 2408135 - 2408518 | 14632.3 |
| calcineurin-like phosphoesterase | SAMN05444680_103378 | Not Available | Negative | 2408515 - 2409393 | 32619.7 |
| hypothetical protein | SAMN05444680_103379 | Not Available | Negative | 2409390 - 2409644 | 9282.05 |
| atpase family associated with various cellular activities (aaa) | SAMN05444680_103380 | Not Available | Negative | 2409918 - 2411294 | 50235.9 |
| transcriptional regulator, tetr family | SAMN05444680_103381 | Not Available | Positive | 2411773 - 2412456 | 24750.5 |
| hypothetical protein | SAMN05444680_103382 | Not Available | Positive | 2412524 - 2414320 | 64799.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
