Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gdpmannose 4,6-dehydratase | SAMN05444680_103353 | Not Available | Negative | 2380403 - 2381440 | 38900.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444680_103354 | Not Available | Negative | 2381473 - 2384781 | 121457.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444680_103355 | Not Available | Positive | 2385331 - 2387427 | 78495.3 |
| lipopolysaccharide transport system atp-binding protein | SAMN05444680_103356 | Not Available | Negative | 2387440 - 2388144 | 24874.2 |
| lipopolysaccharide transport system permease protein | SAMN05444680_103357 | Not Available | Negative | 2388151 - 2388954 | 30624.1 |
| mannose-1-phosphate guanylyltransferase | SAMN05444680_103358 | Not Available | Negative | 2388951 - 2390369 | 51397.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444680_103359 | Not Available | Positive | 2390499 - 2391509 | 38110.0 |
| hypothetical protein | SAMN05444680_103360 | Not Available | Negative | 2391512 - 2392264 | 28655.6 |
| udp-n-acetylmuramyl pentapeptide phosphotransferase/udp-n-acetylglucosamine-1-phosphate transferase | SAMN05444680_103361 | Not Available | Positive | 2392309 - 2393403 | 40284.7 |
| n-acetylglutamate kinase | SAMN05444680_103362 | Not Available | Positive | 2393454 - 2394347 | 31583.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
