Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_103343 | Not Available | Negative | 2367283 - 2367879 | 22777.9 |
| putative flippase gtra (transmembrane translocase of bactoprenol-linked glucose) | SAMN05444680_103344 | Not Available | Negative | 2367876 - 2368286 | 15116.8 |
| glycosyl transferase family 2 | SAMN05444680_103345 | Not Available | Negative | 2368283 - 2369074 | 28396.2 |
| hypothetical protein | SAMN05444680_103346 | Not Available | Positive | 2370159 - 2371820 | 61816.0 |
| hypothetical protein | SAMN05444680_103347 | Not Available | Positive | 2372938 - 2373345 | 15332.5 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444680_103348 | Not Available | Negative | 2373672 - 2374778 | 40977.8 |
| hypothetical protein | SAMN05444680_103349 | Not Available | Negative | 2374756 - 2376990 | 83611.9 |
| predicted sam-depedendent methyltransferase | SAMN05444680_103350 | Not Available | Negative | 2376987 - 2377559 | 21613.5 |
| udp-galactose 4-epimerase | SAMN05444680_103351 | Not Available | Negative | 2378001 - 2379005 | 36682.9 |
| hypothetical protein | SAMN05444680_103352 | Not Available | Negative | 2379227 - 2380297 | 40254.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
