Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative polyhydroxyalkanoic acid system protein | SAMN05444680_103323 | Not Available | Positive | 2347962 - 2348276 | 11327.3 |
| acyl-coa-binding protein | SAMN05444680_103324 | Not Available | Negative | 2348298 - 2348582 | 10417.3 |
| o-antigen ligase | SAMN05444680_103325 | Not Available | Positive | 2348649 - 2349944 | 46709.1 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN05444680_103326 | Not Available | Negative | 2349945 - 2350850 | 32779.3 |
| nucleoside-diphosphate-sugar epimerase | SAMN05444680_103327 | Not Available | Negative | 2350856 - 2351896 | 38853.6 |
| methionyl-trna formyltransferase | SAMN05444680_103328 | Not Available | Negative | 2351925 - 2352878 | 34793.4 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | SAMN05444680_103329 | Not Available | Negative | 2352875 - 2353858 | 36704.7 |
| hypothetical protein | SAMN05444680_103330 | Not Available | Negative | 2353877 - 2355007 | 40520.4 |
| 4-amino-4-deoxy-l-arabinose transferase | SAMN05444680_103331 | Not Available | Negative | 2355004 - 2356734 | 63617.3 |
| hypothetical protein | SAMN05444680_103332 | Not Available | Negative | 2356865 - 2357695 | 29706.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
