Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiosulfate sulfurtransferase | SAMN05444680_103313 | Not Available | Positive | 2336884 - 2337345 | 16324.2 |
| lysm domain-containing protein | SAMN05444680_103314 | Not Available | Negative | 2337342 - 2337809 | 16224.1 |
| type iii pantothenate kinase | SAMN05444680_103315 | Not Available | Positive | 2337927 - 2338709 | 27766.6 |
| protein of unknown function | SAMN05444680_103316 | Not Available | Negative | 2338714 - 2339814 | 40118.0 |
| hippurate hydrolase | SAMN05444680_103317 | Not Available | Negative | 2339811 - 2341025 | 43387.1 |
| acetylornithine deacetylase | SAMN05444680_103318 | Not Available | Positive | 2341110 - 2342318 | 43958.4 |
| uncharacterized membrane-anchored protein yjin, duf445 family | SAMN05444680_103319 | Not Available | Positive | 2342332 - 2343555 | 44892.3 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444680_103320 | Not Available | Negative | 2343572 - 2344693 | 39809.6 |
| anaerobic selenocysteine-containing dehydrogenase | SAMN05444680_103321 | Not Available | Positive | 2344770 - 2346815 | 74204.9 |
| predicted aminopeptidase | SAMN05444680_103322 | Not Available | Positive | 2346812 - 2347969 | 42542.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
