Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipooligosaccharide transport system atp-binding protein | SAMN05444680_103303 | Not Available | Negative | 2324820 - 2325764 | 34701.1 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_103304 | Not Available | Negative | 2325770 - 2326660 | 32931.1 |
| glutathione s-transferase | SAMN05444680_103305 | Not Available | Positive | 2326769 - 2327413 | 23301.1 |
| hypothetical protein | SAMN05444680_103306 | Not Available | Positive | 2327410 - 2328393 | 35219.9 |
| cytochrome p450 | SAMN05444680_103307 | Not Available | Negative | 2328365 - 2329516 | 40520.6 |
| transcriptional regulator, arsr family | SAMN05444680_103308 | Not Available | Positive | 2329568 - 2330254 | 24600.3 |
| amp nucleosidase | SAMN05444680_103309 | Not Available | Negative | 2330360 - 2331877 | 56494.6 |
| nadph-glutathione reductase | SAMN05444680_103310 | Not Available | Negative | 2331907 - 2333262 | 48425.2 |
| fecr family protein | SAMN05444680_103311 | Not Available | Negative | 2333322 - 2335607 | 83905.0 |
| esterase, phb depolymerase family | SAMN05444680_103312 | Not Available | Negative | 2335756 - 2336718 | 34418.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
