Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tcta family transporter | SAMN05444680_103293 | Not Available | Negative | 2314048 - 2315559 | 52753.0 |
| tripartite tricarboxylate transporter tctb family protein | SAMN05444680_103294 | Not Available | Negative | 2315571 - 2316059 | 16991.3 |
| hypothetical protein | SAMN05444680_103295 | Not Available | Negative | 2316191 - 2316406 | 8052.02 |
| low temperature requirement protein ltra | SAMN05444680_103296 | Not Available | Negative | 2316403 - 2317605 | 43379.1 |
| superfamily ii dna and rna helicase | SAMN05444680_103297 | Not Available | Positive | 2317662 - 2318897 | 43977.6 |
| citronellyl-coa dehydrogenase | SAMN05444680_103298 | Not Available | Negative | 2318901 - 2320061 | 42694.5 |
| nucleoside-diphosphate-sugar epimerase | SAMN05444680_103299 | Not Available | Negative | 2320135 - 2321136 | 36239.4 |
| transcriptional regulator, lysr family | SAMN05444680_103300 | Not Available | Positive | 2321225 - 2322142 | 32749.6 |
| dna-binding beta-propeller fold protein ynce | SAMN05444680_103301 | Not Available | Negative | 2322155 - 2323798 | 57617.4 |
| lipooligosaccharide transport system permease protein | SAMN05444680_103302 | Not Available | Negative | 2323882 - 2324706 | 30818.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
