Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide-binding universal stress protein, uspa family | SAMN05444680_103283 | Not Available | Negative | 2301300 - 2301752 | 16282.8 |
| 23s rrna (adenine2503-c2)-methyltransferase | SAMN05444680_103284 | Not Available | Negative | 2301856 - 2302899 | 38096.3 |
| putative abc transport system substrate-binding protein | SAMN05444680_103285 | Not Available | Negative | 2302926 - 2303912 | 35201.6 |
| signal transduction histidine kinase | SAMN05444680_103286 | Not Available | Positive | 2304057 - 2306552 | 90603.8 |
| two-component system, cell cycle response regulator divk | SAMN05444680_103287 | Not Available | Positive | 2306549 - 2306926 | 13833.9 |
| adenylate and guanylate cyclase catalytic domain-containing protein | SAMN05444680_103288 | Not Available | Positive | 2306923 - 2308044 | 41026.7 |
| hypothetical protein | SAMN05444680_103289 | Not Available | Negative | 2308041 - 2309468 | 52101.8 |
| outer membrane autotransporter barrel domain-containing protein | SAMN05444680_103290 | Not Available | Positive | 2309610 - 2312930 | 105506.0 |
| hypothetical protein | SAMN05444680_103291 | Not Available | Negative | 2313011 - 2313355 | 11483.5 |
| hypothetical protein | SAMN05444680_103292 | Not Available | Negative | 2313497 - 2313838 | 12176.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
