Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_103253 | Not Available | Negative | 2270232 - 2271956 | 62339.1 |
| transcriptional regulator, lysr family | SAMN05444680_103254 | Not Available | Positive | 2272062 - 2272946 | 32674.6 |
| phenol 2-monooxygenase | SAMN05444680_103255 | Not Available | Negative | 2273022 - 2274920 | 69122.7 |
| transcriptional regulator, marr family | SAMN05444680_103256 | Not Available | Positive | 2275047 - 2275517 | 17370.9 |
| transcriptional regulator, lysr family | SAMN05444680_103257 | Not Available | Positive | 2275636 - 2276559 | 33195.5 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05444680_103258 | Not Available | Positive | 2276732 - 2277472 | 25888.8 |
| hypothetical protein | SAMN05444680_103259 | Not Available | Positive | 2277593 - 2278006 | 15162.0 |
| ser/thr protein kinase rdoa involved in cpx stress response, mazf antagonist | SAMN05444680_103260 | Not Available | Negative | 2278106 - 2279137 | 38321.4 |
| protein of unknown function | SAMN05444680_103261 | Not Available | Negative | 2279151 - 2280272 | 40591.8 |
| peroxiredoxin, ohr subfamily | SAMN05444680_103262 | Not Available | Negative | 2280399 - 2280827 | 14482.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
