Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444680_103233 | Not Available | Negative | 2251237 - 2251740 | 16499.6 |
| two-component system, ompr family, response regulator/two-component system, ompr family, response regulator qseb | SAMN05444680_103234 | Not Available | Positive | 2251907 - 2252566 | 24192.3 |
| two-component system, ompr family, sensor kinase/two-component system, ompr family, sensor histidine kinase qsec | SAMN05444680_103235 | Not Available | Positive | 2252576 - 2253928 | 49146.6 |
| hypothetical protein | SAMN05444680_103236 | Not Available | Positive | 2253999 - 2254334 | 11139.0 |
| iron(iii) transport system substrate-binding protein | SAMN05444680_103237 | Not Available | Positive | 2254399 - 2255436 | 37735.9 |
| hypothetical protein | SAMN05444680_103238 | Not Available | Negative | 2255449 - 2255793 | 12229.2 |
| hypothetical protein | SAMN05444680_103239 | Not Available | Negative | 2255901 - 2257982 | 73755.5 |
| hypothetical protein | SAMN05444680_103240 | Not Available | Negative | 2257979 - 2258812 | 29483.5 |
| hypothetical protein | SAMN05444680_103241 | Not Available | Negative | 2258809 - 2259303 | 18002.1 |
| hypothetical protein | SAMN05444680_103242 | Not Available | Negative | 2259300 - 2259959 | 22162.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
