Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_103223 | Not Available | Negative | 2240768 - 2241157 | 13688.4 |
| hypothetical protein | SAMN05444680_103224 | Not Available | Positive | 2241277 - 2241381 | 3792.9 |
| k+-transporting atpase atpase f chain | SAMN05444680_103225 | Not Available | Positive | 2241378 - 2241476 | 3526.5 |
| k+-transporting atpase atpase a chain | SAMN05444680_103226 | Not Available | Positive | 2241478 - 2243280 | 62445.7 |
| k+-transporting atpase atpase b chain | SAMN05444680_103227 | Not Available | Positive | 2243289 - 2245382 | 73135.6 |
| k+-transporting atpase atpase c chain | SAMN05444680_103228 | Not Available | Positive | 2245393 - 2245971 | 19950.1 |
| two-component system, ompr family, sensor histidine kinase kdpd | SAMN05444680_103229 | Not Available | Positive | 2246003 - 2248738 | 96942.5 |
| two-component system, ompr family, kdp operon response regulator kdpe | SAMN05444680_103230 | Not Available | Positive | 2248743 - 2249435 | 25211.2 |
| threonine/homoserine efflux transporter rhta | SAMN05444680_103231 | Not Available | Negative | 2249417 - 2250268 | 29221.4 |
| 23s rrna pseudouridine2604 synthase | SAMN05444680_103232 | Not Available | Positive | 2250368 - 2251135 | 28546.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
