Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase | SAMN05444680_101161 | Not Available | Positive | 168129 - 169067 | 34234.0 |
| hypothetical protein | SAMN05444680_101162 | Not Available | Positive | 169196 - 169456 | 9417.37 |
| h+/gluconate symporter | SAMN05444680_101163 | Not Available | Negative | 169473 - 170927 | 49680.8 |
| nte family protein | SAMN05444680_101164 | Not Available | Negative | 170932 - 171945 | 36810.1 |
| membrane fusion protein, multidrug efflux system | SAMN05444680_101165 | Not Available | Positive | 172268 - 173953 | 58475.7 |
| multidrug efflux pump | SAMN05444680_101166 | Not Available | Positive | 173950 - 177144 | 114492.0 |
| outer membrane protein, multidrug efflux system | SAMN05444680_101167 | Not Available | Positive | 177131 - 178615 | 53428.4 |
| transglutaminase-like enzyme, putative cysteine protease | SAMN05444680_101168 | Not Available | Negative | 178623 - 179513 | 33045.0 |
| trna 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein | SAMN05444680_101169 | Not Available | Negative | 179603 - 181489 | 68018.9 |
| fe-s cluster biosynthesis and repair protein yggx | SAMN05444680_101170 | Not Available | Negative | 181503 - 181775 | 10225.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
