Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05444680_103213 | Not Available | Negative | 2230285 - 2231097 | 29702.0 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444680_103214 | Not Available | Negative | 2231129 - 2232454 | 48050.6 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05444680_103215 | Not Available | Negative | 2232485 - 2233549 | 38449.1 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05444680_103216 | Not Available | Negative | 2233553 - 2234482 | 33013.8 |
| amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05444680_103217 | Not Available | Negative | 2234484 - 2235269 | 29171.5 |
| long-chain acyl-coa synthetase | SAMN05444680_103218 | Not Available | Negative | 2235266 - 2237239 | 71729.9 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05444680_103219 | Not Available | Positive | 2237325 - 2238068 | 27372.9 |
| putative sos response-associated peptidase yedk | SAMN05444680_103220 | Not Available | Negative | 2238065 - 2238673 | 22905.9 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444680_103221 | Not Available | Positive | 2238760 - 2239536 | 27403.9 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_103222 | Not Available | Negative | 2239667 - 2240632 | 34105.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
