Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cbs domain-containing protein | SAMN05444680_103203 | Not Available | Positive | 2222056 - 2222487 | 15608.3 |
| methyltransferase domain-containing protein | SAMN05444680_103204 | Not Available | Positive | 2222513 - 2223139 | 23115.3 |
| hypothetical protein | SAMN05444680_103205 | Not Available | Negative | 2223158 - 2223751 | 22048.5 |
| cytosine deaminase | SAMN05444680_103206 | Not Available | Negative | 2223905 - 2225239 | 48444.0 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_103207 | Not Available | Negative | 2225306 - 2226187 | 32336.2 |
| 4-carboxymuconolactone decarboxylase | SAMN05444680_103208 | Not Available | Positive | 2226273 - 2226698 | 15054.5 |
| beta-lactamase class d/beta-lactamase class d oxa-1 | SAMN05444680_103209 | Not Available | Negative | 2226676 - 2227545 | 32296.4 |
| dnaj-class molecular chaperone with c-terminal zn finger domain | SAMN05444680_103210 | Not Available | Positive | 2227629 - 2228684 | 38091.2 |
| uncharacterized conserved protein, duf2164 family | SAMN05444680_103211 | Not Available | Negative | 2228718 - 2228990 | 10458.4 |
| phenylacetate-coa ligase | SAMN05444680_103212 | Not Available | Negative | 2229041 - 2230288 | 44965.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
