Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase e1 component alpha subunit | SAMN05444680_103193 | Not Available | Negative | 2209403 - 2210419 | 34743.2 |
| d-xylose transport system substrate-binding protein | SAMN05444680_103194 | Not Available | Positive | 2210636 - 2211658 | 36001.5 |
| d-xylose transport system permease protein | SAMN05444680_103195 | Not Available | Positive | 2211778 - 2212968 | 41793.5 |
| monosaccharide abc transporter atp-binding protein, cut2 family | SAMN05444680_103196 | Not Available | Positive | 2212965 - 2213729 | 27573.6 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN05444680_103197 | Not Available | Positive | 2213901 - 2215058 | 40735.3 |
| regulatory protein, fis family | SAMN05444680_103198 | Not Available | Negative | 2215064 - 2216287 | 43488.2 |
| quinohemoprotein ethanol dehydrogenase | SAMN05444680_103199 | Not Available | Positive | 2216418 - 2218526 | 76001.0 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_103200 | Not Available | Negative | 2218670 - 2219647 | 34317.8 |
| dehydrogenase (flavoprotein) | SAMN05444680_103201 | Not Available | Negative | 2219747 - 2221075 | 50478.4 |
| nad-dependent deacetylase | SAMN05444680_103202 | Not Available | Positive | 2221205 - 2221948 | 26712.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
