Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit secy/sec61 alpha | SAMN05444680_103173 | Not Available | Positive | 2193007 - 2194317 | 47691.5 |
| bacterial translation initiation factor 1 (bif-1) | SAMN05444680_103174 | Not Available | Positive | 2194325 - 2194543 | 8212.19 |
| lsu ribosomal protein l36p | SAMN05444680_103175 | Not Available | Positive | 2194576 - 2194689 | 4280.44 |
| ssu ribosomal protein s13p | SAMN05444680_103176 | Not Available | Positive | 2194714 - 2195079 | 13783.0 |
| ssu ribosomal protein s11p | SAMN05444680_103177 | Not Available | Positive | 2195092 - 2195496 | 14142.9 |
| ssu ribosomal protein s4p | SAMN05444680_103178 | Not Available | Positive | 2195624 - 2196247 | 23566.2 |
| dna-directed rna polymerase subunit alpha | SAMN05444680_103179 | Not Available | Positive | 2196373 - 2197362 | 36200.6 |
| lsu ribosomal protein l17p | SAMN05444680_103180 | Not Available | Positive | 2197447 - 2197845 | 14902.3 |
| Trna-met | Not Available | Not Available | Positive | 2197864 - 2197940 | Not Available |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05444680_103182 | Not Available | Negative | 2198131 - 2198526 | 14528.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
