Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444680_103153 | Not Available | Negative | 2177490 - 2178269 | 27567.9 |
| aldose 1-epimerase | SAMN05444680_103154 | Not Available | Positive | 2178398 - 2179318 | 33449.6 |
| pp_02093 | SAMN05444680_103155 | Not Available | Negative | 2179583 - 2180755 | Not Available |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | SAMN05444680_103156 | Not Available | Negative | 2180749 - 2181792 | 38236.9 |
| atp-dependent dna helicase recg | SAMN05444680_103157 | Not Available | Positive | 2181862 - 2183976 | 76892.8 |
| lysr family transcriptional regulator, hydrogen peroxide-inducible genes activator | SAMN05444680_103158 | Not Available | Positive | 2184009 - 2184974 | 35338.1 |
| starvation-inducible dna-binding protein | SAMN05444680_103159 | Not Available | Positive | 2185076 - 2185666 | 21255.5 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN05444680_103160 | Not Available | Positive | 2185677 - 2186573 | 32324.8 |
| pyrroline-5-carboxylate reductase | SAMN05444680_103161 | Not Available | Negative | 2186628 - 2187485 | 29501.6 |
| uncharacterized conserved protein | SAMN05444680_103162 | Not Available | Negative | 2187489 - 2188646 | 42118.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
