Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-amino-acid dehydrogenase | SAMN05444680_103139 | Not Available | Negative | 2166855 - 2168168 | 47750.0 |
| d-amino-acid dehydrogenase | SAMN05444680_103142 | Not Available | Negative | 2168502 - 2169740 | 45112.6 |
| transcriptional regulator, xre family | SAMN05444680_103145 | Not Available | Negative | 2170072 - 2170806 | 28018.3 |
| hypothetical protein | SAMN05444680_103146 | Not Available | Positive | 2170933 - 2171775 | 29540.1 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferases | SAMN05444680_103147 | Not Available | Positive | 2171801 - 2173753 | 70519.5 |
| pap2 superfamily protein | SAMN05444680_103148 | Not Available | Positive | 2173764 - 2174426 | 23371.6 |
| hypothetical protein | SAMN05444680_103149 | Not Available | Positive | 2174530 - 2175015 | 17976.9 |
| hypothetical protein | SAMN05444680_103150 | Not Available | Positive | 2175054 - 2175512 | 15011.4 |
| hypothetical protein | SAMN05444680_103151 | Not Available | Positive | 2175509 - 2176393 | 32347.9 |
| hypothetical protein | SAMN05444680_103152 | Not Available | Positive | 2176429 - 2177517 | 40888.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
