Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-(3-hydroxy-phenyl)propionate hydroxylase | SAMN05444680_103129 | Not Available | Positive | 2156273 - 2158018 | 63219.0 |
| protein of unknown function | SAMN05444680_103130 | Not Available | Positive | 2158015 - 2158224 | 7431.81 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_103131 | Not Available | Positive | 2158266 - 2159240 | 34503.8 |
| antitoxin component ywqk of the ywqjk toxin-antitoxin module | SAMN05444680_103132 | Not Available | Negative | 2159390 - 2160568 | 43562.7 |
| hypothetical protein | SAMN05444680_103133 | Not Available | Negative | 2160565 - 2160975 | 15333.2 |
| hypothetical protein | SAMN05444680_103134 | Not Available | Positive | 2161051 - 2161407 | 12115.1 |
| iron complex outermembrane recepter protein | SAMN05444680_103135 | Not Available | Positive | 2161510 - 2163831 | 83968.4 |
| hypothetical protein | SAMN05444680_103136 | Not Available | Positive | 2163868 - 2164764 | 30789.9 |
| hypothetical protein | SAMN05444680_103137 | Not Available | Positive | 2164848 - 2165585 | 25538.2 |
| small ligand-binding sensory domain fist | SAMN05444680_103138 | Not Available | Positive | 2165626 - 2166894 | 44516.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
