Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-alanine--pyruvate transaminase | SAMN05444680_103119 | Not Available | Positive | 2145951 - 2147285 | 48396.2 |
| uncharacterized iron-regulated protein | SAMN05444680_103120 | Not Available | Negative | 2147269 - 2148093 | 29154.1 |
| protein of unknown function | SAMN05444680_103121 | Not Available | Negative | 2148186 - 2148464 | 10263.0 |
| predicted purr-regulated permease perm | SAMN05444680_103122 | Not Available | Negative | 2148580 - 2149650 | 37742.6 |
| salicylate hydroxylase | SAMN05444680_103123 | Not Available | Negative | 2149720 - 2150862 | 41244.9 |
| transcriptional regulator, arac family | SAMN05444680_103124 | Not Available | Positive | 2151027 - 2152010 | 36033.6 |
| protein of unknown function | SAMN05444680_103125 | Not Available | Negative | 2152071 - 2153216 | 40297.1 |
| fumarylacetoacetate (faa) hydrolase | SAMN05444680_103126 | Not Available | Positive | 2153317 - 2154348 | 36977.9 |
| predicted nucleotide-binding protein containing tir-like domain-containing protein | SAMN05444680_103127 | Not Available | Negative | 2154350 - 2155360 | 37873.1 |
| transcriptional regulator, luxr family | SAMN05444680_103128 | Not Available | Negative | 2155413 - 2156192 | 28223.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
