Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginase | SAMN05444680_103109 | Not Available | Negative | 2133831 - 2134742 | 32556.8 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444680_103110 | Not Available | Negative | 2134807 - 2136057 | 44675.5 |
| transcriptional regulator, tetr family | SAMN05444680_103111 | Not Available | Negative | 2136085 - 2136774 | 25928.7 |
| long-chain acyl-coa synthetase | SAMN05444680_103112 | Not Available | Positive | 2136850 - 2138463 | 57854.3 |
| biotin-requiring enzyme | SAMN05444680_103113 | Not Available | Positive | 2138468 - 2141767 | 115888.0 |
| yxwgxw repeat-containing protein | SAMN05444680_103114 | Not Available | Positive | 2141863 - 2142240 | 14335.8 |
| tigr00659 family protein | SAMN05444680_103115 | Not Available | Negative | 2142262 - 2142990 | 25226.5 |
| putative effector of murein hydrolase lrga, upf0299 family | SAMN05444680_103116 | Not Available | Negative | 2142999 - 2143358 | 12909.5 |
| glycolate oxidase | SAMN05444680_103117 | Not Available | Negative | 2143361 - 2144866 | 53441.3 |
| formyltetrahydrofolate deformylase | SAMN05444680_103118 | Not Available | Negative | 2145017 - 2145862 | 31504.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
