Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus retraction atpase pilt | SAMN05444680_10399 | Not Available | Negative | 2123244 - 2124287 | 38167.2 |
| hypothetical protein | SAMN05444680_103100 | Not Available | Positive | 2124332 - 2125012 | 24416.3 |
| 4-oxalocrotonate tautomerase | SAMN05444680_103101 | Not Available | Negative | 2125009 - 2125233 | 8116.76 |
| lrp/asnc family transcriptional regulator, leucine-responsive regulatory protein | SAMN05444680_103102 | Not Available | Negative | 2125315 - 2125794 | 17894.8 |
| l-proline dehydrogenase /delta-1-pyrroline-5-carboxylate dehydrogenase | SAMN05444680_103103 | Not Available | Positive | 2125896 - 2128877 | 105721.0 |
| glutamate dehydrogenase (nad(p)+) | SAMN05444680_103104 | Not Available | Positive | 2128962 - 2130239 | 46103.3 |
| panthothenate kinase | SAMN05444680_103105 | Not Available | Positive | 2130236 - 2130865 | 23340.9 |
| hypothetical protein | SAMN05444680_103106 | Not Available | Positive | 2130972 - 2131613 | 22957.1 |
| hypothetical protein | SAMN05444680_103107 | Not Available | Positive | 2131662 - 2131928 | 10029.9 |
| hypothetical protein | SAMN05444680_103108 | Not Available | Negative | 2131937 - 2133799 | 65523.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
