Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylate cyclase, class 3 | SAMN05444680_10389 | Not Available | Negative | 2113226 - 2115031 | 65680.5 |
| uncharacterized membrane protein | SAMN05444680_10390 | Not Available | Negative | 2115145 - 2115717 | 20554.1 |
| glutathione s-transferase | SAMN05444680_10391 | Not Available | Positive | 2115812 - 2116540 | 26814.9 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN05444680_10392 | Not Available | Negative | 2116544 - 2117332 | 27702.9 |
| putative endonuclease | SAMN05444680_10393 | Not Available | Positive | 2117479 - 2117859 | 13803.5 |
| phosphoheptose isomerase | SAMN05444680_10394 | Not Available | Positive | 2117874 - 2118521 | 22280.5 |
| nte family protein | SAMN05444680_10395 | Not Available | Negative | 2118528 - 2119982 | 53224.9 |
| osmotically-inducible protein osmy, contains bon domain | SAMN05444680_10396 | Not Available | Positive | 2120182 - 2120997 | 27744.8 |
| 3-hydroxyisobutyrate dehydrogenase/2-hydroxy-3-oxopropionate reductase | SAMN05444680_10397 | Not Available | Negative | 2121131 - 2122051 | 32089.4 |
| twitching motility protein pilu | SAMN05444680_10398 | Not Available | Negative | 2122077 - 2123213 | 41882.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
