Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_10379 | Not Available | Negative | 2104461 - 2105027 | 22212.8 |
| hypothetical protein | SAMN05444680_10380 | Not Available | Negative | 2105024 - 2105737 | 26637.3 |
| formyl-coa transferase | SAMN05444680_10381 | Not Available | Positive | 2105777 - 2106985 | 42867.5 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN05444680_10382 | Not Available | Negative | 2107053 - 2107418 | 12882.5 |
| nte family protein | SAMN05444680_10383 | Not Available | Positive | 2107477 - 2107770 | 10963.3 |
| ala-trna(pro) deacylase | SAMN05444680_10384 | Not Available | Negative | 2107750 - 2108229 | 17369.8 |
| hypothetical protein | SAMN05444680_10385 | Not Available | Negative | 2108336 - 2108851 | 18221.8 |
| hypothetical protein | SAMN05444680_10386 | Not Available | Negative | 2108854 - 2110080 | 41820.1 |
| hypothetical protein | SAMN05444680_10387 | Not Available | Negative | 2110204 - 2112030 | 65409.1 |
| pap2 superfamily protein | SAMN05444680_10388 | Not Available | Negative | 2112058 - 2113191 | 40633.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
