Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase, cbb3-type, subunit iii | SAMN05444680_10369 | Not Available | Negative | 2090598 - 2091212 | 21071.9 |
| outer membrane protein, multidrug efflux system | SAMN05444680_10370 | Not Available | Negative | 2091405 - 2092835 | 51244.7 |
| multidrug efflux pump | SAMN05444680_10371 | Not Available | Negative | 2092828 - 2095986 | 112449.0 |
| membrane fusion protein, multidrug efflux system | SAMN05444680_10372 | Not Available | Negative | 2096000 - 2097265 | 43721.6 |
| transcriptional regulator, tetr family | SAMN05444680_10373 | Not Available | Positive | 2097433 - 2098065 | 23598.4 |
| Trna-arg | Not Available | Not Available | Positive | 2098109 - 2098183 | Not Available |
| predicted atp-binding protein involved in virulence | SAMN05444680_10375 | Not Available | Positive | 2099390 - 2100697 | 47939.4 |
| tigr02646 family protein | SAMN05444680_10376 | Not Available | Positive | 2100694 - 2101629 | 34887.3 |
| hypothetical protein | SAMN05444680_10377 | Not Available | Positive | 2103180 - 2103278 | 3662.63 |
| protein of unknown function | SAMN05444680_10378 | Not Available | Negative | 2103292 - 2104365 | 39909.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
