Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative mrna 3-end processing factor | SAMN05444680_10359 | Not Available | Positive | 2082311 - 2083363 | 37816.6 |
| dna ligase-1 | SAMN05444680_10360 | Not Available | Positive | 2083360 - 2085006 | 61270.6 |
| cyclic nucleotide-binding domain-containing protein | SAMN05444680_10361 | Not Available | Positive | 2085084 - 2085602 | 18603.6 |
| tlp18.3, psb32 and molo-1 founding protein of phosphatase | SAMN05444680_10362 | Not Available | Negative | 2085618 - 2086136 | 19553.5 |
| uncharacterized protein | SAMN05444680_10363 | Not Available | Negative | 2086138 - 2087067 | 31126.0 |
| lema protein | SAMN05444680_10364 | Not Available | Negative | 2087084 - 2087680 | 22333.5 |
| hypothetical protein | SAMN05444680_10365 | Not Available | Positive | 2087725 - 2088486 | 27619.4 |
| ketosteroid isomerase homolog | SAMN05444680_10366 | Not Available | Positive | 2088550 - 2089005 | 16195.0 |
| hypothetical protein | SAMN05444680_10367 | Not Available | Positive | 2089005 - 2089967 | 35227.2 |
| protein of unknown function | SAMN05444680_10368 | Not Available | Positive | 2089985 - 2090530 | 20062.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
