Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase f1 subcomplex delta subunit | SAMN05444680_10349 | Not Available | Positive | 2071121 - 2071651 | 18329.1 |
| atp synthase f1 subcomplex alpha subunit | SAMN05444680_10350 | Not Available | Positive | 2071688 - 2073241 | 55457.5 |
| atp synthase f1 subcomplex gamma subunit | SAMN05444680_10351 | Not Available | Positive | 2073263 - 2074138 | 31474.2 |
| atp synthase f1 subcomplex beta subunit | SAMN05444680_10352 | Not Available | Positive | 2074191 - 2075606 | 50841.1 |
| atp synthase f1 subcomplex epsilon subunit | SAMN05444680_10353 | Not Available | Positive | 2075616 - 2076035 | 14719.6 |
| rok family protein (putative glucokinase) | SAMN05444680_10354 | Not Available | Positive | 2076304 - 2077506 | 41906.9 |
| monosaccharide abc transporter atp-binding protein, cut2 family | SAMN05444680_10355 | Not Available | Positive | 2077503 - 2079038 | 55283.9 |
| monosaccharide abc transporter membrane protein, cut2 family | SAMN05444680_10356 | Not Available | Positive | 2079010 - 2080029 | 35135.0 |
| monosaccharide abc transporter substrate-binding protein, cut2 family | SAMN05444680_10357 | Not Available | Positive | 2080083 - 2081051 | 34893.9 |
| predicted dehydrogenase | SAMN05444680_10358 | Not Available | Positive | 2081060 - 2082217 | 41632.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
