Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | SAMN05444680_10319 | Not Available | Negative | 2044323 - 2044820 | 17773.6 |
| hypothetical protein | SAMN05444680_10320 | Not Available | Positive | 2044946 - 2045461 | 17532.7 |
| pts system, ascorbate-specific iia component | SAMN05444680_10321 | Not Available | Positive | 2045541 - 2045996 | 16325.8 |
| phosphocarrier protein | SAMN05444680_10322 | Not Available | Positive | 2045965 - 2046234 | 9507.6 |
| phosphoenolpyruvate--protein phosphotransferase | SAMN05444680_10323 | Not Available | Positive | 2046394 - 2048196 | 66046.7 |
| ltxxq motif family protein | SAMN05444680_10324 | Not Available | Positive | 2048316 - 2048777 | 16834.0 |
| protein of unknown function | SAMN05444680_10325 | Not Available | Positive | 2048774 - 2049280 | 17272.2 |
| two-component system, ompr family, response regulator rpab | SAMN05444680_10326 | Not Available | Positive | 2049311 - 2049997 | 25648.1 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN05444680_10327 | Not Available | Positive | 2049994 - 2051277 | 47154.2 |
| sulfate permease, mfs superfamily | SAMN05444680_10328 | Not Available | Negative | 2051258 - 2052940 | 58431.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
