Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, lysr family | SAMN05444680_101140 | Not Available | Positive | 150926 - 151906 | 36813.8 |
| hypothetical protein | SAMN05444680_101141 | Not Available | Positive | 152202 - 153194 | 35871.2 |
| protein of unknown function | SAMN05444680_101142 | Not Available | Positive | 153257 - 153601 | 12965.7 |
| protein of unknown function | SAMN05444680_101143 | Not Available | Negative | 153630 - 153812 | 6891.13 |
| Trna-asn | Not Available | Not Available | Positive | 153979 - 154054 | Not Available |
| thiamine-phosphate diphosphorylase | SAMN05444680_101145 | Not Available | Negative | 154120 - 155067 | 33603.1 |
| thiazole-phosphate synthase | SAMN05444680_101146 | Not Available | Negative | 155064 - 155882 | 29264.1 |
| sulfur carrier protein | SAMN05444680_101147 | Not Available | Negative | 155891 - 156088 | 7183.63 |
| glycine oxidase | SAMN05444680_101148 | Not Available | Negative | 156085 - 157200 | 40156.7 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | SAMN05444680_101149 | Not Available | Positive | 157245 - 158090 | 28874.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
