Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssu ribosomal protein s19p | SAMN05444680_1039 | Not Available | Positive | 2039200 - 2039478 | 10400.9 |
| lsu ribosomal protein l22p | SAMN05444680_10310 | Not Available | Positive | 2039488 - 2039820 | 12072.8 |
| ssu ribosomal protein s3p | SAMN05444680_10311 | Not Available | Positive | 2039836 - 2040735 | 32850.5 |
| lsu ribosomal protein l16p | SAMN05444680_10312 | Not Available | Positive | 2040764 - 2041180 | 15463.9 |
| lsu ribosomal protein l29p | SAMN05444680_10313 | Not Available | Positive | 2041195 - 2041440 | 8930.91 |
| ssu ribosomal protein s17p | SAMN05444680_10314 | Not Available | Positive | 2041450 - 2041719 | 10146.5 |
| peroxiredoxin | SAMN05444680_10315 | Not Available | Positive | 2041791 - 2042297 | 17575.9 |
| ribosomal protein s18 acetylase rimi | SAMN05444680_10316 | Not Available | Negative | 2042311 - 2042892 | 20787.7 |
| cytochrome b | SAMN05444680_10317 | Not Available | Negative | 2042889 - 2043602 | 25576.5 |
| cytochrome c556 | SAMN05444680_10318 | Not Available | Positive | 2043758 - 2044204 | 15918.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
