Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pxpv repeat-containing protein | SAMN05444680_102995 | Not Available | Negative | 2032507 - 2032917 | 14412.2 |
| hypothetical protein | SAMN05444680_102996 | Not Available | Negative | 2033096 - 2033778 | 24006.9 |
| elongation factor tu | SAMN05444680_1031 | Not Available | Positive | 2033779 - 2033928 | 5198.49 |
| ssu ribosomal protein s10p | SAMN05444680_1032 | Not Available | Positive | 2033957 - 2034271 | 11868.7 |
| hypothetical protein | SAMN05444680_1033 | Not Available | Positive | 2034398 - 2035996 | 54100.5 |
| hypothetical protein | SAMN05444680_1034 | Not Available | Positive | 2035993 - 2036526 | 17667.2 |
| lsu ribosomal protein l3p | SAMN05444680_1035 | Not Available | Positive | 2036730 - 2037410 | 23578.3 |
| lsu ribosomal protein l4p | SAMN05444680_1036 | Not Available | Positive | 2037410 - 2038030 | 23083.9 |
| lsu ribosomal protein l23p | SAMN05444680_1037 | Not Available | Positive | 2038027 - 2038362 | 12135.9 |
| lsu ribosomal protein l2p | SAMN05444680_1038 | Not Available | Positive | 2038365 - 2039189 | 30094.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
