Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_102965 | Not Available | Positive | 2003718 - 2004461 | 25324.9 |
| atp:adp antiporter, aaa family | SAMN05444680_102966 | Not Available | Positive | 2004458 - 2005771 | 47020.1 |
| predicted oxidoreductase | SAMN05444680_102967 | Not Available | Positive | 2005768 - 2006664 | 32720.2 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05444680_102968 | Not Available | Negative | 2006669 - 2007544 | 30341.4 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444680_102969 | Not Available | Positive | 2007651 - 2008553 | 32599.9 |
| o-acetylserine/cysteine efflux transporter | SAMN05444680_102970 | Not Available | Negative | 2008554 - 2009483 | 33126.8 |
| udp-glucose 4-epimerase | SAMN05444680_102971 | Not Available | Negative | 2009480 - 2010487 | 36373.9 |
| bile acid:na+ symporter, bass family | SAMN05444680_102972 | Not Available | Negative | 2010515 - 2011435 | 32486.0 |
| predicted flavoprotein czco associated with the cation diffusion facilitator czcd | SAMN05444680_102973 | Not Available | Negative | 2011464 - 2012783 | 49016.2 |
| short-chain dehydrogenase | SAMN05444680_102974 | Not Available | Negative | 2012830 - 2013663 | 29130.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
