Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized radical sam protein ygiq | SAMN05444680_102955 | Not Available | Positive | 1992009 - 1994372 | 87326.6 |
| hypothetical protein | SAMN05444680_102956 | Not Available | Positive | 1994434 - 1995345 | 34275.1 |
| ribonuclease t2 | SAMN05444680_102957 | Not Available | Negative | 1995373 - 1996032 | 23370.6 |
| nucleotide-binding universal stress protein, uspa family | SAMN05444680_102958 | Not Available | Negative | 1996185 - 1996631 | 16200.7 |
| glycosyl hydrolases family 28 | SAMN05444680_102959 | Not Available | Negative | 1996743 - 1998980 | 76893.6 |
| hemerythrin hhe cation binding domain-containing protein | SAMN05444680_102960 | Not Available | Positive | 1999552 - 2000271 | 26652.1 |
| pyridoxamine 5'-phosphate oxidase | SAMN05444680_102961 | Not Available | Negative | 2000276 - 2001631 | 48683.5 |
| hypothetical protein | SAMN05444680_102962 | Not Available | Negative | 2001645 - 2002145 | 17864.6 |
| regulatory helix-turn-helix protein, lysr family | SAMN05444680_102963 | Not Available | Negative | 2002217 - 2002513 | 10935.2 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_102964 | Not Available | Positive | 2002622 - 2003638 | 35358.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
