Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein, duf924 family | SAMN05444680_102945 | Not Available | Negative | 1982575 - 1983120 | 20133.6 |
| chrd domain-containing protein | SAMN05444680_102946 | Not Available | Positive | 1983226 - 1983678 | 15431.6 |
| nte family protein | SAMN05444680_102947 | Not Available | Positive | 1983723 - 1984946 | 44695.1 |
| 3-hydroxybutyrate dehydrogenase | SAMN05444680_102948 | Not Available | Positive | 1985059 - 1985841 | 27409.1 |
| lysr family transcriptional regulator, regulatory protein for tcuabc | SAMN05444680_102949 | Not Available | Positive | 1985886 - 1986812 | 33140.5 |
| tricarballylate dehydrogenase | SAMN05444680_102950 | Not Available | Positive | 1986890 - 1988302 | 50754.5 |
| citrate/tricarballylate utilization protein | SAMN05444680_102951 | Not Available | Positive | 1988289 - 1989476 | 42953.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_102952 | Not Available | Positive | 1989506 - 1990483 | 33987.3 |
| cupin domain-containing protein | SAMN05444680_102953 | Not Available | Positive | 1990571 - 1990888 | 11669.6 |
| transcriptional regulator, marr family with acetyltransferase activity | SAMN05444680_102954 | Not Available | Negative | 1990902 - 1991858 | 35224.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
