Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_102935 | Not Available | Positive | 1975455 - 1975658 | 7415.74 |
| acyl-coa thioesterase-1 | SAMN05444680_102936 | Not Available | Negative | 1975729 - 1976307 | 20382.8 |
| putative abc transport system atp-binding protein | SAMN05444680_102937 | Not Available | Positive | 1976381 - 1977094 | 25457.5 |
| 23s rrna gm-2251 2'-o-methyltransferase | SAMN05444680_102938 | Not Available | Positive | 1977236 - 1977982 | 26245.9 |
| 2-pyrone-4,6-dicarboxylate lactonase | SAMN05444680_102939 | Not Available | Positive | 1977996 - 1978868 | 31890.3 |
| protein of unknown function | SAMN05444680_102940 | Not Available | Negative | 1978879 - 1979355 | 17219.7 |
| predicted oxidoreductase | SAMN05444680_102941 | Not Available | Negative | 1979360 - 1980316 | 34141.7 |
| chromate transporter | SAMN05444680_102942 | Not Available | Negative | 1980339 - 1980938 | 21260.2 |
| chromate transporter | SAMN05444680_102943 | Not Available | Negative | 1981000 - 1981590 | 20987.3 |
| membrane protein | SAMN05444680_102944 | Not Available | Positive | 1981655 - 1982605 | 34007.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
