Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| condensin subunit scpb | SAMN05444680_102915 | Not Available | Positive | 1954826 - 1955644 | 29387.2 |
| ribosomal large subunit pseudouridine synthase b | SAMN05444680_102916 | Not Available | Positive | 1955641 - 1957365 | 61980.1 |
| nucleoside diphosphate kinase | SAMN05444680_102917 | Not Available | Positive | 1957517 - 1957942 | 15254.4 |
| 23s rrna m(2)a-2503 methyltransferase | SAMN05444680_102918 | Not Available | Positive | 1957962 - 1959110 | 42131.6 |
| type iv pilus assembly protein pilf | SAMN05444680_102919 | Not Available | Positive | 1959115 - 1959951 | 30749.3 |
| cytoskeleton protein rodz | SAMN05444680_102920 | Not Available | Positive | 1959944 - 1960840 | 30533.8 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | SAMN05444680_102921 | Not Available | Positive | 1960851 - 1962143 | 46313.7 |
| histidyl-trna synthetase | SAMN05444680_102922 | Not Available | Positive | 1962155 - 1963465 | 48048.6 |
| putative negative regulator of rcsb-dependent stress response | SAMN05444680_102923 | Not Available | Positive | 1963472 - 1964164 | 25322.8 |
| beta-barrel assembly machine subunit bamb | SAMN05444680_102924 | Not Available | Positive | 1964161 - 1965306 | 39624.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
