Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine-trna-protein transferase | SAMN05444680_101130 | Not Available | Negative | 139976 - 140728 | 28583.1 |
| leucyl/phenylalanyl-trna--protein transferase | SAMN05444680_101131 | Not Available | Negative | 140725 - 141477 | 27572.1 |
| carbon-monoxide dehydrogenase large subunit | SAMN05444680_101132 | Not Available | Positive | 141595 - 143925 | 82087.8 |
| p-hydroxybenzoate 3-monooxygenase | SAMN05444680_101133 | Not Available | Negative | 143944 - 145125 | 43685.9 |
| transcriptional regulator, iclr family | SAMN05444680_101134 | Not Available | Positive | 145248 - 146018 | 27942.8 |
| two-component system, ompr family, response regulator | SAMN05444680_101135 | Not Available | Positive | 146074 - 146733 | 24705.0 |
| two-component system, ompr family, sensor kinase | SAMN05444680_101136 | Not Available | Positive | 146741 - 148063 | 47310.3 |
| serine protease do | SAMN05444680_101137 | Not Available | Positive | 148169 - 149650 | 51054.1 |
| hypothetical protein | SAMN05444680_101138 | Not Available | Positive | 149793 - 150119 | 11480.5 |
| fha domain-containing protein | SAMN05444680_101139 | Not Available | Positive | 150464 - 150850 | 13970.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
