Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| propionyl-coa synthetase | SAMN05444680_102904 | Not Available | Positive | 1940038 - 1941942 | 69225.1 |
| 2-oxoglutarate dehydrogenase e1 component | SAMN05444680_102906 | Not Available | Positive | 1942198 - 1945077 | 106164.0 |
| 2-oxoglutarate dehydrogenase e2 component | SAMN05444680_102907 | Not Available | Positive | 1945124 - 1946386 | 43648.9 |
| dihydrolipoamide dehydrogenase | SAMN05444680_102908 | Not Available | Positive | 1946397 - 1947827 | 50220.3 |
| cell division protein zape | SAMN05444680_102909 | Not Available | Positive | 1947832 - 1948929 | 42146.7 |
| hypothetical protein | SAMN05444680_102910 | Not Available | Positive | 1948926 - 1949606 | 25452.5 |
| serine/threonine protein phosphatase prpc | SAMN05444680_102911 | Not Available | Negative | 1949631 - 1950326 | 25207.3 |
| atp-dependent dna helicase ding | SAMN05444680_102912 | Not Available | Positive | 1950730 - 1952727 | 72186.4 |
| beta-barrel assembly machine subunit bamd | SAMN05444680_102913 | Not Available | Negative | 1952847 - 1953656 | 30591.1 |
| ribosomal large subunit pseudouridine synthase d | SAMN05444680_102914 | Not Available | Positive | 1953671 - 1954696 | 37005.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
