Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_102894 | Not Available | Negative | 1933401 - 1933682 | 10108.8 |
| hypothetical protein | SAMN05444680_102895 | Not Available | Negative | 1933706 - 1933921 | 8062.43 |
| universal stress protein family protein | SAMN05444680_102896 | Not Available | Negative | 1933947 - 1934840 | 31888.4 |
| osmotically-inducible protein osmy, contains bon domain | SAMN05444680_102897 | Not Available | Positive | 1935022 - 1935675 | 23471.1 |
| transcriptional regulator, trar/dksa family | SAMN05444680_102898 | Not Available | Positive | 1935698 - 1936078 | 15028.7 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05444680_102899 | Not Available | Positive | 1936236 - 1936922 | 24812.3 |
| glycine zipper 2tm domain-containing protein | SAMN05444680_102900 | Not Available | Positive | 1937054 - 1937521 | 15204.2 |
| predicted fe2+/mn2+ transporter, vit1/ccc1 family | SAMN05444680_102901 | Not Available | Negative | 1937552 - 1938259 | 24062.1 |
| cytochrome b561 | SAMN05444680_102902 | Not Available | Negative | 1938269 - 1938508 | 8923.21 |
| chromate transporter | SAMN05444680_102903 | Not Available | Positive | 1938656 - 1939885 | 42746.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
