Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-[acyl-carrier-protein] reductase | SAMN05444680_102884 | Not Available | Negative | 1923739 - 1924458 | 24583.6 |
| chaperonin groel | SAMN05444680_102885 | Not Available | Positive | 1924684 - 1926309 | 57886.1 |
| hypothetical protein | SAMN05444680_102886 | Not Available | Positive | 1926353 - 1926895 | 19573.5 |
| cbs domain-containing protein | SAMN05444680_102887 | Not Available | Positive | 1926905 - 1927396 | 17077.4 |
| sagb-type dehydrogenase domain-containing protein | SAMN05444680_102888 | Not Available | Negative | 1927430 - 1928035 | 21880.3 |
| hypothetical protein | SAMN05444680_102889 | Not Available | Negative | 1928088 - 1929569 | 54349.2 |
| heat shock protein hsp20 | SAMN05444680_102890 | Not Available | Negative | 1929575 - 1930003 | 15779.7 |
| hypothetical protein | SAMN05444680_102891 | Not Available | Positive | 1930157 - 1930969 | 29333.7 |
| serine protease do | SAMN05444680_102892 | Not Available | Negative | 1930931 - 1932436 | 52748.1 |
| nucleotide-binding universal stress protein, uspa family | SAMN05444680_102893 | Not Available | Positive | 1932546 - 1933367 | 29422.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
