Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family secretion protein | SAMN05444680_102874 | Not Available | Positive | 1914996 - 1916195 | 41718.8 |
| lipoprotein-releasing system permease protein | SAMN05444680_102875 | Not Available | Positive | 1916210 - 1917445 | 43558.6 |
| lipoprotein-releasing system atp-binding protein | SAMN05444680_102876 | Not Available | Positive | 1917459 - 1918127 | 23677.9 |
| hypothetical protein | SAMN05444680_102877 | Not Available | Negative | 1918114 - 1918260 | 5040.26 |
| protein of unknown function | SAMN05444680_102878 | Not Available | Negative | 1918257 - 1918472 | 7371.23 |
| nucleotide-binding universal stress protein, uspa family | SAMN05444680_102879 | Not Available | Negative | 1918567 - 1919094 | 18880.6 |
| protein-tyrosine-phosphatase | SAMN05444680_102880 | Not Available | Negative | 1919224 - 1919778 | 20429.7 |
| lipid-binding sylf domain-containing protein | SAMN05444680_102881 | Not Available | Negative | 1919873 - 1920433 | 18434.0 |
| metallo-beta-lactamase family protein | SAMN05444680_102882 | Not Available | Positive | 1920630 - 1921982 | 49323.4 |
| mechanosensitive ion channel | SAMN05444680_102883 | Not Available | Positive | 1922088 - 1923731 | 59638.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
