Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide-binding universal stress protein, uspa family | SAMN05444680_102854 | Not Available | Positive | 1895982 - 1896494 | 17975.6 |
| thymidine phosphorylase | SAMN05444680_102855 | Not Available | Positive | 1896529 - 1898034 | 53100.4 |
| cholesterol transport system auxiliary component | SAMN05444680_102856 | Not Available | Negative | 1898047 - 1898679 | 22361.8 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | SAMN05444680_102857 | Not Available | Negative | 1898676 - 1899614 | 32305.4 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | SAMN05444680_102858 | Not Available | Negative | 1899599 - 1900411 | 29536.8 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN05444680_102859 | Not Available | Negative | 1900426 - 1901526 | 38998.1 |
| protein required for attachment to host cells | SAMN05444680_102860 | Not Available | Negative | 1901560 - 1902021 | 16819.8 |
| cbs domain-containing protein | SAMN05444680_102861 | Not Available | Positive | 1902207 - 1902713 | 17209.7 |
| osmotically-inducible protein osmy, contains bon domain | SAMN05444680_102862 | Not Available | Negative | 1902724 - 1903374 | 23288.8 |
| hypothetical protein | SAMN05444680_102863 | Not Available | Negative | 1903511 - 1903930 | 14689.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
